TweetFollow Us on Twitter

Mac in the Shell: Debugging Python

Volume Number: 25
Issue Number: 11
Column Tag: Mac in the Shell

Mac in the Shell: Debugging Python

Stepping through code with pdb

by Edward Marczak


We've been covering Python in this column for the last few months. We've gone from the basics, such as built in data types, variable assignment and so on, through more advanced concepts such as creating classes and integrating with Cocoa via PyObj-C. The intent was never to imagine that this column alone would turn you into a master Python programmer, but to give you the tools and direction to do so. One tool that you will need on that journey, though, is a decent debugger. While it's less common in scripting languages like Python and Ruby to use a debugger, when something is just not working out as expected and you can't figure out why, a peek at the code while it's running is invaluable. This month, I'll show you how to do that in Python using the python debugger ("pdb").

Do The Needful

Using a Shell

The instructions in this column always try to respect the way people are used to working. However, debuggers are interactive and grew up in a shell environment. While there may be interaction with certain editors, that will be outside of the scope for this article. Edit in whatever editor you like, but we're going to run and debug from a shell. (I think the general unease with the shell is lessening in the Mac community...right?). So, fire up (or iTerm, Terminator, etc.) and we'll get started.

Learning Your History

A debugger is itself a program that lets you examine another running program. You can use a debugger to step through the running code of the target program one line at a time, examine the values of variables at a given point in the code, run up until a certain breakpoint and examine a program crash or exception. One of the more well-known multi-language debuggers is the GNU Debugger, or "gdb." While you could use gdb to debug Python, there happens to exist a Python-specific clone of GDB called pdb, or, the Python Debugger.

In many scripting languages, programs are typically relatively short, and debuggers are often unnecessary. Many scripters are accustomed to sprinkling 'print' or logging statements through their code that reveals the value of particular variables at a particular point in the program's execution. However, you may have realized that Python is a bit more grown up than many traditional scripting languages. There are many fairly large systems written in Python. As an application gets larger and contains more dependencies, a dedicated debugger becomes not only useful, but necessary.

Getting Started

We'll start off with some simple code as an example of basic debugging. You write the code in listing 1 in the hopes finding prime numbers through and including 10.

Listing 1: - sample code for debugging.

for n in range(2, 10):
  for x in range(2, n):
    if n % x == 0:
      print n, 'equals', x, '*', n/x
      print n, 'is a prime number'

Of course, you run this code and see something a little different than you expected—there are two problems in this code. A basic reason for debugging! (Kudos if you already see the errors).

The Python debugger is implemented as a module, so, like other modules, you need to import it. Add the following import after the shebang line:

import pdb

You'll also need to pick a point where you want to start tracing. Since this is an example, we'll start right at the top. So also add the set_trace method immediately following the import statement:


Now you can just run the program (mark it as executable first with a chmod 770 or simlar). However, when you run the program this time, you're looking at something different. Something like this:

$ ./ > /Users/marczak/dev/py/<module>() -> for n in range(2, 10): (Pdb)

What you are looking at is the pdb interactive debugger waiting for your command. You'll see this when the pdb.set_trace() method is called. At this point, pdb stops all execution, displays the statement that it's waiting to execute next and displays its prompt. For our purposes, we want to execute this line (for n in range(2, 10)), so, we enter n, for "next." After pressing return, we're greeted with new information and a new prompt:

-> for x in range(2, n):

Ah! We've moved on to the next line of the program, and are looking at the next statement to execute. To do so, you can simply press return, as pdb will repeat the last command you gave it by pressing return. Keep doing this a few times until you're comfortable with the display and what you're looking at.

Just so we can get back in sync, quit the debugger and we'll start again. To quit pdb at any time, issue a q command. You'll see a diagnostic "bdb.BdbQuit" line printed and find yourself back at a shell prompt.

Run your program again and let it drop into the debugger, and let's do something a little more useful this time. Tracing program flow is useful, but just as useful is being able to examine the value of variables. You're now essentially waiting for the first line of the program to execute: "for n in range(2, 10)." If you try to examine the variable n right now, you'll receive an error, since this line hasn't yet executed and n isn't yet defined.

First, execute this first line by entering n for "next," then enter p n, which stands for "print the contents of n." You can display the contents of any variable with the p ("print") command. In our example, the output should look like this:

-> for x in range(2, n):
(Pdb) p n

This is completely in line with our expectations: n is 2, right at the beginning of its range. (Note that the displayed line is the next line, not the one we're examining the variable of).

Finding our problem

Let's go off and find our problem, which is actually two-fold. The output currently looks like this:

3 is a prime number
4 equals 2 * 2
5 is a prime number
5 is a prime number
5 is a prime number
6 equals 2 * 3
7 is a prime number
7 is a prime number
7 is a prime number
7 is a prime number
7 is a prime number
8 equals 2 * 4
9 is a prime number
9 equals 3 * 3

This is all technically correct, but ugly. What's with the repeating lines? Also, we wanted to find values through 10, not 9. Since the first time we see the repeating lines is when n is equal to 5, let's find that point. Run the program, step through each line using the n command until you see the first output of "5 is a prime number." It will look like this:

> /Users/marczak/dev/py/ (9)<module>()
-> if n % x == 0:
> /Users/marczak/dev/py/ (14)<module>()
-> print n, 'is a prime number'
5 is a prime number
> /Users/marczak/dev/py/ (8)<module>()
-> for x in range(2, n):

Now, let's pay attention as we continue to step through. After a few iterations (or sooner), it should become clear: our if statement is not True, which is fine, and the else clause is running our print statement, which isn't fine. We really only want to print that notification on the way out of the loop when it fails to find a factor. So, our logic error is simple: we have the wrong level of indentation on the else statement. It should be un-indented one level, to be a part of the for loop. The entire loop should look like this:

for n in range(2, 10):
  for x in range(2, n):
    if n % x == 0:
      print n, 'equals', x, '*', n/x
    print n, 'is a prime number'

Again, notice the subtle difference in indentation for the else portion – it's really a part of the for loop. If you're 'too close' to your code, that's an easy one to miss. However, debugging can be similar to explaining your code to a rubber duck—you know how it's supposed to work, but you only have the 'a ha!' as you step through it.

Make it Easier

We found our major error, but now have another: we want to print primes up through and including the number 10. If you're like me, you need a refresher at this point as to where you are in the code. Issuing an l (not "one," but "ell," for "list") will do just that:

(Pdb) l
  3     import pdb
  5     pdb.set_trace()
  7     for n in range(2, 10):
  8  ->     for x in range(2, n):
  9         if n % x == 0:
 10           print n, 'equals', x, '*', n/x
 11           break
 12         else:
 13           # loop fell through without finding a factor

Ah! Now I know where I am. All we're really interested in from this point on is the value of n. Stepping through the remainder of the code shows that the initial for loop exits after 9. Didn't we ask it to run until 10?

Yes we did, but that's our misconception. Looking at the Python documentation for range() shows that the range intentionally excludes the final number.

While this may not be a common mistake that you make, it turns out that this is still a useful exercise: you may not always be debugging your own code.

Dealing with Functions

There's a few more pdb commands to understand before you tackle larger python programs. Specifically, you'll want to know how to deal with functions. Take, for example, the code in listing 2.

Listing 2:

import pdb
def _PrintDict(dict):
  """Recursively iterate over a dictionary, printing results
    dict: The dictionary to print
  for item in dict:
    if type(dict[item]) == dict:
      print "%s: %s" % (dict[item], type(dict[item]))
def main():
  """Main routine"""
  aDict = {'color': 'blue',
           'count': 15,
           'cust_info': {'pid': '94758476', 'uid': '348576'},
           'style': 'fruit'}
if __name__ == "__main__":

This should look vaguely familiar to anyone who read the previous column on Python. Start this program running and step through it with n—you'll see python touch each function name to create an object for it. If you keep tracing with n ("next"), this program will end very quickly. This is because when the n command reaches a function, it executes the entire function without entering that function. So, stop tracing with n when you arrive at the call to main():

-> if __name__ == "__main__":
(Pdb) n
> /Users/marczak/dev/py/<module>()
-> main()

We want to step into main(), so go ahead and enter s (for "step"). You should be greeted with:

def main():

showing that you're now looking at the definition for main(). Keep stepping as we want to also step into the call to _PrintDict().

When you do arrive in the _PrintDict() function, there's a for loop. Once you've traversed that loop, you may no longer be deeply interested in it, but want to get back to where you were before entering this function. pdb has a solution for you: r, for "return." Essentially, "finish up this function and return."

Be aware! Stepping into functions sometimes will have an unintended consequence for you: stepping into an library that you've included. This is often not the code that you're interested in debugging, though it may be. If you accidentally step into a library function—PyObj-C code included—just remember the r command and return until you're back to where you expect.

More pdb Features

You now know the core of pdb and can actually do some serious debugging. However, pdb offers a lot more. Some of which we'll save for another column, but there are two more useful things to pass on.

The easy way out: c, for "continue." If at any point, you've traced through all you've wanted to trace, but don't want to crash the program with a quit (q) command, there is another option. The continue command picks up and runs the remainder of the program.

Even better, though, is this: pdb is letting you load and run your Python program in an interactive environment. You can alter variables just by assigning them:

(Pdb) x =7
(Pdb) p x

Imagine the simple code in listing 3.

Listing 3:

import pdb
x = 5
for i in range(1, 10):
  print i + x

At any time after x gets assigned, you can reassign it. Your debugging session can look like this:

$ ./ 
> /Users/marczak/dev/py /<module>()
-> x = 5
(Pdb) n
> /Users/marczak/dev/py /<module>()
-> for i in range(1, 10):
> /Users/marczak/dev/py /<module>()
-> print i + x
> /Users/marczak/dev/py /<module>()
-> for i in range(1, 10):
(Pdb) x = 20
(Pdb) n
> /Users/marczak/dev/py /<module>()
-> print i + x

This is fantastic news if you want to test your code for fragility around scenarios where variable reach certain values. Of course, as the code runs, if a variable gets reassigned in your program, you need to watch for that.

Reference Sheet

Here's a handy list of the pdb topics discussed in this article:

pdb library: import pdb
Start tracing: pdb.set_trace()
n: execute next command
s: step into a function
r: return from function
c: continue running program
q: quit pdb (and error out of program).


While you may focus on shorted programs now, as your skills improve, your programs should grow in complexity and size. At some point, you'll likely confound yourself, and a debugger comes in very handy during these times. Fortunately, Python has an available debugger that is friendly to use and easy to make available to your program.

Media of the month: I've been in a "back to school" kind of way, but really just studying on my own. There's too much to learn, right? Well, I've taken the school approach: one topic a day and rotate through them and study each night. Now, I'm not recommending anything this drastic, but, I'd bet there's one subject that you've wanted to learn. Now is the time. Hit up your local bookstore, University or, find a book and go. If you're still an actual student, well, keep going!

Until next month, keep scripting.

Ed Marczak is the Executive Editor for MacTech Magazine, and has written the Mac in the Shell column since 2004.


Community Search:
MacTech Search:

Software Updates via MacUpdate

Opera 48.0.2685.50 - High-performance We...
Opera is a fast and secure browser trusted by millions of users. With the intuitive interface, Speed Dial and visual bookmarks for organizing favorite sites, news feature with fresh, relevant content... Read more
Tor Browser Bundle 7.0.7 - Anonymize Web...
The Tor Browser Bundle is an easy-to-use portable package of Tor, Vidalia, Torbutton, and a Firefox fork preconfigured to work together out of the box. It contains a modified copy of Firefox that... Read more
FotoMagico 5.5 - Powerful slideshow crea...
FotoMagico lets you create professional slideshows from your photos and music with just a few, simple mouse clicks. It sports a very clean and intuitive yet powerful user interface. High image... Read more
Adobe Audition CC 2018 11.0.0 - Professi...
Audition CC 2018 is available as part of Adobe Creative Cloud for as little as $19.99/month (or $9.99/month if you're a previous Audition customer). Adobe Audition CC 2018 empowers you to create and... Read more
Alfred 3.5.1 - Quick launcher for apps a...
Alfred is an award-winning productivity application for OS X. Alfred saves you time when you search for files online or on your Mac. Be more productive with hotkeys, keywords, and file actions at... Read more
AirRadar 4.0 - $9.95
With AirRadar, scanning for wireless networks is now easier and more personalized! It allows you to scan for open networks and tag them as favourites or filter them out. View detailed network... Read more
DEVONthink Pro 2.9.16 - Knowledge base,...
Save 10% with our exclusive coupon code: MACUPDATE10 DEVONthink Pro is your essential assistant for today's world, where almost everything is digital. From shopping receipts to important research... Read more
ForkLift 3.0.8 Beta - Powerful file mana...
ForkLift is a powerful file manager and ferociously fast FTP client clothed in a clean and versatile UI that offers the combination of absolute simplicity and raw power expected from a well-executed... Read more
Data Rescue 5.0.1 - Powerful hard drive...
Data Rescue’s new and improved features let you scan, search, and recover your files faster than ever before. We have modernized the file-preview capabilities, added new files types to the recovery... Read more
Dropbox 37.4.29 - Cloud backup and synch...
Dropbox is an application that creates a special Finder folder that automatically syncs online and between your computers. It allows you to both backup files and keep them up-to-date between systems... Read more

Halcyon 6: Starbase Commander (Games)
Halcyon 6: Starbase Commander Device: iOS Universal Category: Games Price: $6.99, Version: (iTunes) Description: An epic space strategy RPG with base building, deep tactical combat, crew management, alien diplomacy,... | Read more »
Legacy of Discord celebrates its 1 year...
It’s been a thrilling first year for fans of Legacy of Discord, the stunning PvP dungeon-crawling ARPG from YOOZOO Games, and now it’s time to celebrate the game’s first anniversary. The developers are amping up the festivities with some exciting... | Read more »
3 reasons to play Thunder Armada - the n...
The bygone days of the Battleship board game might have past, but naval combat simulators still find an audience on mobile. Thunder Armada is Chinese developer Chyogames latest entry into the genre, drawing inspiration from the explosive exchanges... | Read more »
Experience a full 3D fantasy MMORPG, as...
Those hoping to sink their teeth into a meaty hack and slash RPG that encourages you to fight with others might want to check out EZFun’s new Eternity Guardians. Available to download for iOS and Android, Eternity Guardians is an MMORPG that lets... | Read more »
Warhammer Quest 2 (Games)
Warhammer Quest 2 1.0 Device: iOS Universal Category: Games Price: $4.99, Version: 1.0 (iTunes) Description: Dungeon adventures in the Warhammer World are back! | Read more »
4 of the best Halloween updates for mobi...
Halloween is certainly one of our favorite times for mobile game updates. Many popular titles celebrate this spooky season with fun festivities that can stretch from one week to even the whole month. As we draw closer and closer to Halloween, we'... | Read more »
Fire Rides guide - how to swing to succe...
It's another day, which means another Voodoo game has come to glue our hands to our mobile phones. Yes, it's been an especially prolific month for this particular mobile publisher, but we're certainly not complaining. Fire Rides is yet another... | Read more »
Time Recoil (Games)
Time Recoil 1.0.1 Device: iOS Universal Category: Games Price: $3.99, Version: 1.0.1 (iTunes) Description: Time Recoil is a top-down shooter where you kill to slow time, dominate slow motion gunfights, and trigger devastating special... | Read more »
Campfire Cooking (Games)
Campfire Cooking 1.0 Device: iOS Universal Category: Games Price: $3.99, Version: 1.0 (iTunes) Description: | Read more »
Returner 77 (Games)
Returner 77 1.0 Device: iOS Universal Category: Games Price: $4.99, Version: 1.0 (iTunes) Description: Returner 77 is a cinematic space mystery puzzle game. You are in a giant alien spaceship hovering above Earth, after everything... | Read more »

Price Scanner via

Apple restocks full line of refurbished 13″ M...
Apple has restocked a full line of Apple Certified Refurbished 2017 13″ MacBook Pros for $200-$300 off MSRP. A standard Apple one-year warranty is included with each MacBook, and shipping is free.... Read more
13″ 3.1GHz/256GB MacBook Pro on sale for $167...
Amazon has the 2017 13″ 3.1GHz/256GB Space Gray MacBook Pro on sale today for $121 off MSRP including free shipping: – 13″ 3.1GHz/256GB Space Gray MacBook Pro (MPXV2LL/A): $1678 $121 off MSRP Keep an... Read more
13″ MacBook Pros on sale for up to $120 off M...
B&H Photo has 2017 13″ MacBook Pros in stock today and on sale for up to $120 off MSRP, each including free shipping plus NY & NJ sales tax only: – 13-inch 2.3GHz/128GB Space Gray MacBook... Read more
15″ MacBook Pros on sale for up to $200 off M...
B&H Photo has 15″ MacBook Pros on sale for up to $200 off MSRP. Shipping is free, and B&H charges sales tax in NY & NJ only: – 15″ 2.8GHz MacBook Pro Space Gray (MPTR2LL/A): $2249, $150... Read more
Roundup of Apple Certified Refurbished iMacs,...
Apple has a full line of Certified Refurbished 2017 21″ and 27″ iMacs available starting at $1019 and ranging up to $350 off original MSRP. Apple’s one-year warranty is standard, and shipping is free... Read more
Sale! 27″ 3.8GHz 5K iMac for $2098, save $201...
Amazon has the 27″ 3.8GHz 5K iMac (MNED2LL/A) on sale today for $2098 including free shipping. Their price is $201 off MSRP, and it’s the lowest price available for this model (Apple’s $1949... Read more
Sale! 10″ Apple WiFi iPad Pros for up to $100...
B&H Photo has 10.5″ WiFi iPad Pros in stock today and on sale for $50-$100 off MSRP. Each iPad includes free shipping, and B&H charges sales tax in NY & NJ only: – 10.5″ 64GB iPad Pro: $... Read more
Apple iMacs on sale for up to $130 off MSRP w...
B&H Photo has 21-inch and 27-inch iMacs in stock and on sale for up to $130 off MSRP including free shipping. B&H charges sales tax in NY & NJ only: – 27″ 3.8GHz iMac (MNED2LL/A): $2179 $... Read more
2017 3.5GHz 6-Core Mac Pro on sale for $2799,...
B&H Photo has the 2017 3.5GHz 6-Core Mac Pro (MD878LL/A) on sale today for $2799 including free shipping plus NY & NJ sales tax only . Their price is $200 off MSRP. Read more
12″ 1.2GHz Space Gray MacBook on sale for $11...
Amazon has the 2017 12″ 1.2GHz Space Gray Retina MacBook on sale for $100 off MSRP. Shipping is free: 12″ 1.2GHz Space Gray MacBook: $1199.99 $100 off MSRP Read more

Jobs Board

Frameworks Engineer, *Apple* Watch - Apple...
Job Summary Join the team that is shaping the future of software development for Apple Watch! As a software engineer on the Apple Watch Frameworks team you will Read more
*Apple* News Product Marketing Mgr., Publish...
Job Summary The Apple News Product Marketing Manager will work closely with a cross-functional group to assist in defining and marketing new features and services. Read more
Fraud Analyst, *Apple* Advertising Platform...
Job Summary Apple Ad Platforms has an opportunity to redefine advertising on mobile devices. Apple reaches hundreds of millions of iPhone, iPod touch, and iPad Read more
*Apple* Information Security - Security Data...
Job Summary This role is responsible for helping to strengthen Apple 's information security posture through the identification and curation of security event data. Read more
Lead *Apple* Solution Consultant - Apple In...
…develop a team of diverse partner employees focusing on excellence to deliver the Apple story. Even when you're not present, you will maintain a consistent influence Read more
All contents are Copyright 1984-2011 by Xplain Corporation. All rights reserved. Theme designed by Icreon.